Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 TSPY5P-201ENST00000426936 936 ntBASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 SLC25A1P2-201ENST00000430693 912 ntBASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AC141257.4-201ENST00000634557 245 ntBASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AC136944.6-201ENST00000634818 245 ntBASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHAC2Q9Y5I4 AL391422.3-201ENST00000603791 2761 ntBASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 CCR12P-201ENST00000446203 998 ntBASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHAC2Q9Y5I4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 COX11P1-201ENST00000489116 835 ntBASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHAC2Q9Y5I4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 AL160286.2-201ENST00000567150 934 ntBASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 AC010653.2-201ENST00000623505 997 ntBASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHAC2Q9Y5I4 AC073314.1-201ENST00000568729 2216 ntBASIC23.27■■□□□ 1.31
PCDHAC2Q9Y5I4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 AL023973.1-201ENST00000624619 620 ntBASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 KRT8P41-201ENST00000533985 1514 ntBASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHAC2Q9Y5I4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 AL441883.1-201ENST00000566170 1045 ntBASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 AL353719.1-201ENST00000566847 864 ntBASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHAC2Q9Y5I4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms