Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PTBP1P-201ENST00000554374 1601 ntBASIC18.46■□□□□ 0.55
AP4S1Q9Y587 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 WIZP1-201ENST00000531444 2299 ntBASIC18.46■□□□□ 0.55
AP4S1Q9Y587 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 AC027682.1-201ENST00000562846 899 ntBASIC18.46■□□□□ 0.55
AP4S1Q9Y587 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4S1Q9Y587 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
AP4S1Q9Y587 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AP4S1Q9Y587 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 AC135279.3-201ENST00000610945 1311 ntBASIC18.45■□□□□ 0.54
AP4S1Q9Y587 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4S1Q9Y587 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 AL356441.2-201ENST00000443009 864 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L2-201ENST00000561772 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L6-201ENST00000626483 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L1-201ENST00000627662 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L8-201ENST00000629013 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L3-201ENST00000630187 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L7-201ENST00000630678 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 DUX4L5-201ENST00000630834 1275 ntBASIC18.44■□□□□ 0.54
AP4S1Q9Y587 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4S1Q9Y587 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 RBM17P2-201ENST00000616397 1405 ntBASIC18.43■□□□□ 0.54
AP4S1Q9Y587 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.43■□□□□ 0.54
AP4S1Q9Y587 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms