Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 GCSHP5-201ENST00000443090 522 ntBASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 LINC01465-201ENST00000408887 1940 ntBASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LSM4Q9Y4Z0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSM4Q9Y4Z0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 AP001271.2-201ENST00000624018 1556 ntBASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 KRT8P17-201ENST00000453110 1448 ntBASIC15.6■□□□□ 0.09
LSM4Q9Y4Z0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms