Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 AC079598.2-202ENST00000546624 1451 ntBASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 AC008764.7-201ENST00000593779 1081 ntBASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LSM5Q9Y4Y9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AC007322.3-201ENST00000426526 701 ntBASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LSM5Q9Y4Y9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LSM5Q9Y4Y9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.08■□□□□ 0.17
LSM5Q9Y4Y9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 AC138907.5-202ENST00000569484 235 ntBASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 KRT87P-202ENST00000534226 1464 ntBASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LSM5Q9Y4Y9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 AC079140.4-201ENST00000507448 529 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms