Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 LINC01238-205ENST00000567549 1107 ntBASIC21.83■■□□□ 1.09
GNEQ9Y223 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GNEQ9Y223 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.83■■□□□ 1.09
GNEQ9Y223 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
GNEQ9Y223 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GNEQ9Y223 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GNEQ9Y223 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GNEQ9Y223 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
GNEQ9Y223 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.83■■□□□ 1.08
GNEQ9Y223 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.83■■□□□ 1.08
GNEQ9Y223 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
GNEQ9Y223 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
GNEQ9Y223 AL031133.1-201ENST00000406807 723 ntBASIC21.82■■□□□ 1.08
GNEQ9Y223 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.82■■□□□ 1.08
GNEQ9Y223 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 AL160286.2-201ENST00000567150 934 ntBASIC21.82■■□□□ 1.08
GNEQ9Y223 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
GNEQ9Y223 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GNEQ9Y223 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
GNEQ9Y223 AP001271.2-201ENST00000624018 1556 ntBASIC21.82■■□□□ 1.08
GNEQ9Y223 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GNEQ9Y223 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
GNEQ9Y223 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
GNEQ9Y223 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.81■■□□□ 1.08
GNEQ9Y223 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.81■■□□□ 1.08
GNEQ9Y223 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.81■■□□□ 1.08
GNEQ9Y223 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.81■■□□□ 1.08
GNEQ9Y223 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.81■■□□□ 1.08
GNEQ9Y223 AL353719.1-201ENST00000566847 864 ntBASIC21.81■■□□□ 1.08
GNEQ9Y223 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 AL358472.4-201ENST00000633140 710 ntBASIC21.81■■□□□ 1.08
GNEQ9Y223 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
GNEQ9Y223 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GNEQ9Y223 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
GNEQ9Y223 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GNEQ9Y223 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 TSPY5P-201ENST00000426936 936 ntBASIC21.8■■□□□ 1.08
GNEQ9Y223 TSPY17P-201ENST00000450329 467 ntBASIC21.8■■□□□ 1.08
GNEQ9Y223 COX11P1-201ENST00000489116 835 ntBASIC21.8■■□□□ 1.08
GNEQ9Y223 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.8■■□□□ 1.08
GNEQ9Y223 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
GNEQ9Y223 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.8■■□□□ 1.08
GNEQ9Y223 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
GNEQ9Y223 AC141257.4-201ENST00000634557 245 ntBASIC21.8■■□□□ 1.08
GNEQ9Y223 AC136944.6-201ENST00000634818 245 ntBASIC21.8■■□□□ 1.08
GNEQ9Y223 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.8■■□□□ 1.08
GNEQ9Y223 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GNEQ9Y223 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.8■■□□□ 1.08
GNEQ9Y223 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.79■■□□□ 1.08
GNEQ9Y223 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.79■■□□□ 1.08
GNEQ9Y223 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
GNEQ9Y223 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 AC091076.1-201ENST00000610741 619 ntBASIC21.79■■□□□ 1.08
GNEQ9Y223 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
GNEQ9Y223 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.79■■□□□ 1.08
GNEQ9Y223 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GNEQ9Y223 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GNEQ9Y223 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GNEQ9Y223 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.78■■□□□ 1.08
GNEQ9Y223 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GNEQ9Y223 FEM1AP1-201ENST00000431297 1995 ntBASIC21.78■■□□□ 1.08
GNEQ9Y223 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GNEQ9Y223 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms