Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
SPG7Q9UQ90 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPG7Q9UQ90 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPG7Q9UQ90 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 RNF152P1-201ENST00000397754 604 ntBASIC25.57■■□□□ 1.68
SPG7Q9UQ90 TSPY17P-201ENST00000450329 467 ntBASIC25.57■■□□□ 1.68
SPG7Q9UQ90 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPG7Q9UQ90 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 FAM8A6P-201ENST00000407496 1135 ntBASIC25.56■■□□□ 1.68
SPG7Q9UQ90 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.56■■□□□ 1.68
SPG7Q9UQ90 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 YBX1P2-201ENST00000489612 999 ntBASIC25.55■■□□□ 1.68
SPG7Q9UQ90 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SPG7Q9UQ90 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 COX11P1-201ENST00000489116 835 ntBASIC25.54■■□□□ 1.68
SPG7Q9UQ90 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SPG7Q9UQ90 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 TSPY5P-201ENST00000426936 936 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 AL353719.1-201ENST00000566847 864 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 AC141257.4-201ENST00000634557 245 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 AC136944.6-201ENST00000634818 245 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 MYC-208ENST00000641036 567 ntBASIC25.53■■□□□ 1.68
SPG7Q9UQ90 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPG7Q9UQ90 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms