Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.06■□□□□ 0
NOTCH3Q9UM47 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NOTCH3Q9UM47 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.05■□□□□ 0
NOTCH3Q9UM47 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NOTCH3Q9UM47 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NOTCH3Q9UM47 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NOTCH3Q9UM47 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NOTCH3Q9UM47 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.05■□□□□ 0
NOTCH3Q9UM47 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.05■□□□□ -0
NOTCH3Q9UM47 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.05■□□□□ -0
NOTCH3Q9UM47 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NOTCH3Q9UM47 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NOTCH3Q9UM47 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.05■□□□□ -0
NOTCH3Q9UM47 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 AC027702.1-201ENST00000563810 1770 ntBASIC15.05■□□□□ -0
NOTCH3Q9UM47 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NOTCH3Q9UM47 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 KRT16P1-201ENST00000399124 1418 ntBASIC15.04■□□□□ -0
NOTCH3Q9UM47 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 CR392000.1-201ENST00000624770 1228 ntBASIC15.04■□□□□ -0
NOTCH3Q9UM47 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NOTCH3Q9UM47 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.04■□□□□ -0
NOTCH3Q9UM47 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms