Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 AC006011.2-201ENST00000621313 1158 ntBASIC19.73■□□□□ 0.75
MBD1Q9UIS9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 BX119927.1-201ENST00000636596 1552 ntBASIC19.73■□□□□ 0.75
MBD1Q9UIS9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD1Q9UIS9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 ECEL1P2-202ENST00000465689 757 ntBASIC19.72■□□□□ 0.75
MBD1Q9UIS9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 WWOX-216ENST00000569818 525 ntBASIC19.72■□□□□ 0.75
MBD1Q9UIS9 AP005242.2-201ENST00000580065 1175 ntBASIC19.72■□□□□ 0.75
MBD1Q9UIS9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.72■□□□□ 0.75
MBD1Q9UIS9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 AL691432.2-201ENST00000607222 2038 ntBASIC19.72■□□□□ 0.75
MBD1Q9UIS9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MBD1Q9UIS9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD1Q9UIS9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 TSPY14P-201ENST00000303979 915 ntBASIC19.7■□□□□ 0.74
MBD1Q9UIS9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 AC004980.1-204ENST00000429707 299 ntBASIC19.7■□□□□ 0.74
MBD1Q9UIS9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 C2orf69P3-201ENST00000565542 1120 ntBASIC19.7■□□□□ 0.74
MBD1Q9UIS9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD1Q9UIS9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD1Q9UIS9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms