Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 KRT16P6-202ENST00000425692 1426 ntBASIC19.44■□□□□ 0.7
SPASTQ9UBP0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 FAM210CP-201ENST00000445714 574 ntBASIC19.44■□□□□ 0.7
SPASTQ9UBP0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.44■□□□□ 0.7
SPASTQ9UBP0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.43■□□□□ 0.7
SPASTQ9UBP0 AC092720.2-201ENST00000602388 1665 ntBASIC19.43■□□□□ 0.7
SPASTQ9UBP0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPASTQ9UBP0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 AP006587.1-201ENST00000534129 1502 ntBASIC19.41■□□□□ 0.7
SPASTQ9UBP0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 NUDT16P1-203ENST00000513809 620 ntBASIC19.41■□□□□ 0.7
SPASTQ9UBP0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPASTQ9UBP0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 MMP23A-201ENST00000234610 1017 ntBASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 KSR1P1-201ENST00000446298 240 ntBASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms