Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 FAM207BP-201ENST00000447172 505 ntBASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 AC087388.1-201ENST00000571370 1112 ntBASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AC073314.1-201ENST00000568729 2216 ntBASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AC091390.4-202ENST00000476426 537 ntBASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AC096733.2-201ENST00000609937 1394 ntBASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AC020907.5-201ENST00000624372 1936 ntBASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 AP005212.1-201ENST00000581547 1997 ntBASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
DNMT3BQ9UBC3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 KRT8P8-201ENST00000434750 1448 ntBASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 BX664615.1-201ENST00000443558 458 ntBASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 Z85996.1-201ENST00000494644 937 ntBASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3BQ9UBC3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DNMT3BQ9UBC3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DNMT3BQ9UBC3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.86
DNMT3BQ9UBC3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DNMT3BQ9UBC3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 AK4P3-201ENST00000418260 669 ntBASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3BQ9UBC3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 HMGA1P5-201ENST00000412453 271 ntBASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 AC116562.4-202ENST00000641738 218 ntBASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3BQ9UBC3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3BQ9UBC3 AC073130.3-201ENST00000624389 2278 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms