Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 AL136038.3-201ENST00000561909 1096 ntBASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SLC52A1Q9NWF4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 KRT8P45-201ENST00000414328 1447 ntBASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC28.09■■■□□ 2.09
SLC52A1Q9NWF4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLC52A1Q9NWF4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 AL450487.1-201ENST00000426799 995 ntBASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 TPM4P1-201ENST00000436100 807 ntBASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC52A1Q9NWF4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 AP000523.1-201ENST00000398242 1049 ntBASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 AC093458.2-201ENST00000623150 629 ntBASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SLC52A1Q9NWF4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 NEK4P2-201ENST00000580004 1012 ntBASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLC52A1Q9NWF4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 LINC01465-201ENST00000408887 1940 ntBASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 AC069148.1-201ENST00000608741 768 ntBASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 HYMAI.1-201ENST00000620949 238 ntBASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms