Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZCCHC3Q9NUD5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AL355802.2-201ENST00000402069 882 ntBASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 AL121906.2-201ENST00000621597 723 ntBASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
ZCCHC3Q9NUD5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZCCHC3Q9NUD5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 SOX15-203ENST00000570788 1093 ntBASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZCCHC3Q9NUD5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 HLA-L-209ENST00000420110 1011 ntBASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 AC087289.5-201ENST00000586076 3175 ntBASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 Z82202.1-201ENST00000623446 1880 ntBASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZCCHC3Q9NUD5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms