Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC087388.1-201ENST00000571370 1112 ntBASIC21.92■■□□□ 1.1
VTA1Q9NP79 AL138966.2-201ENST00000621997 464 ntBASIC21.92■■□□□ 1.1
VTA1Q9NP79 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 AL023803.3-201ENST00000615559 522 ntBASIC21.91■■□□□ 1.1
VTA1Q9NP79 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VTA1Q9NP79 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.91■■□□□ 1.1
VTA1Q9NP79 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 TSPY17P-201ENST00000450329 467 ntBASIC21.9■■□□□ 1.1
VTA1Q9NP79 AC063952.2-201ENST00000498792 1227 ntBASIC21.9■■□□□ 1.1
VTA1Q9NP79 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.9■■□□□ 1.1
VTA1Q9NP79 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTA1Q9NP79 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VTA1Q9NP79 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
VTA1Q9NP79 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VTA1Q9NP79 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VTA1Q9NP79 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VTA1Q9NP79 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 AC117947.1-201ENST00000427448 529 ntBASIC21.89■■□□□ 1.09
VTA1Q9NP79 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.89■■□□□ 1.09
VTA1Q9NP79 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 AC022616.7-201ENST00000525383 220 ntBASIC21.89■■□□□ 1.09
VTA1Q9NP79 LINC01238-205ENST00000567549 1107 ntBASIC21.89■■□□□ 1.09
VTA1Q9NP79 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.89■■□□□ 1.09
VTA1Q9NP79 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTA1Q9NP79 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.88■■□□□ 1.09
VTA1Q9NP79 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.88■■□□□ 1.09
VTA1Q9NP79 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VTA1Q9NP79 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.88■■□□□ 1.09
VTA1Q9NP79 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 CA15P1-201ENST00000481698 905 ntBASIC21.88■■□□□ 1.09
VTA1Q9NP79 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.88■■□□□ 1.09
VTA1Q9NP79 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VTA1Q9NP79 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VTA1Q9NP79 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 AC009237.14-201ENST00000609975 1594 ntBASIC21.87■■□□□ 1.09
VTA1Q9NP79 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
VTA1Q9NP79 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VTA1Q9NP79 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTA1Q9NP79 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
VTA1Q9NP79 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
VTA1Q9NP79 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms