Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN3Q9H347 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 UBE2SP1-201ENST00000450587 669 ntBASIC18.1■□□□□ 0.49
UBQLN3Q9H347 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 AC124016.1-201ENST00000609552 612 ntBASIC18.1■□□□□ 0.49
UBQLN3Q9H347 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN3Q9H347 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 AL023875.1-201ENST00000640777 796 ntBASIC18.09■□□□□ 0.49
UBQLN3Q9H347 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 TREX1-205ENST00000625293 1783 ntBASIC18.09■□□□□ 0.49
UBQLN3Q9H347 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.09■□□□□ 0.49
UBQLN3Q9H347 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 AC018445.3-201ENST00000624177 1945 ntBASIC18.08■□□□□ 0.49
UBQLN3Q9H347 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN3Q9H347 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AC239809.2-201ENST00000415381 517 ntBASIC18.08■□□□□ 0.48
UBQLN3Q9H347 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AC093827.2-201ENST00000512654 315 ntBASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 FAM197Y4-202ENST00000622692 608 ntBASIC18.08■□□□□ 0.48
UBQLN3Q9H347 AP006294.2-201ENST00000641667 209 ntBASIC18.08■□□□□ 0.48
UBQLN3Q9H347 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN3Q9H347 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms