Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AL136038.3-201ENST00000561909 1096 ntBASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AL441883.1-201ENST00000566170 1045 ntBASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AL512604.3-201ENST00000569583 964 ntBASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 AL023973.1-201ENST00000624619 620 ntBASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE2OQ9C0C9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 AP006587.1-201ENST00000534129 1502 ntBASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 AC011298.2-201ENST00000617989 482 ntBASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 CR769767.2-201ENST00000622735 460 ntBASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
UBE2OQ9C0C9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 AL845331.1-201ENST00000424978 1190 ntBASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 AC004263.2-201ENST00000617183 678 ntBASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE2OQ9C0C9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 AC004870.1-201ENST00000315132 882 ntBASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 PRELID1P1-202ENST00000567272 903 ntBASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 KRT8P10-201ENST00000450021 1447 ntBASIC21.54■■□□□ 1.04
UBE2OQ9C0C9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 AC008622.2-201ENST00000617006 1229 ntBASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 KRT8P36-201ENST00000489121 1440 ntBASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 AC092338.2-201ENST00000568827 1415 ntBASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 RCC2P6-201ENST00000526625 1557 ntBASIC21.53■■□□□ 1.04
UBE2OQ9C0C9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms