Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM2Q9C040 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM2Q9C040 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM2Q9C040 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM2Q9C040 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM2Q9C040 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM2Q9C040 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM2Q9C040 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.96■□□□□ 0.46
TRIM2Q9C040 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM2Q9C040 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM2Q9C040 TFP1-202ENST00000475455 1573 ntBASIC17.96■□□□□ 0.46
TRIM2Q9C040 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 MIR4651-201ENST00000582622 73 ntBASIC17.95■□□□□ 0.46
TRIM2Q9C040 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM2Q9C040 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM2Q9C040 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 HLA-B-256ENST00000639848 1089 ntBASIC17.94■□□□□ 0.46
TRIM2Q9C040 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM2Q9C040 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM2Q9C040 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM2Q9C040 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 MYC-209ENST00000641252 345 ntBASIC17.93■□□□□ 0.46
TRIM2Q9C040 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM2Q9C040 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms