Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 PHGDH-210ENST00000641115 1638 ntBASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXP3Q9BZS1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXP3Q9BZS1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
FOXP3Q9BZS1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 AC091874.3-201ENST00000512672 1195 ntBASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXP3Q9BZS1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 AC105020.6-201ENST00000621523 1217 ntBASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXP3Q9BZS1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 AL138781.2-201ENST00000617896 1843 ntBASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXP3Q9BZS1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
FOXP3Q9BZS1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXP3Q9BZS1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXP3Q9BZS1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXP3Q9BZS1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXP3Q9BZS1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms