Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 AC233702.5-201ENST00000584107 538 ntBASIC17.4■□□□□ 0.38
USB1Q9BQ65 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
USB1Q9BQ65 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USB1Q9BQ65 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
USB1Q9BQ65 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USB1Q9BQ65 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 NBPF21P-201ENST00000425093 1451 ntBASIC17.39■□□□□ 0.37
USB1Q9BQ65 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 AC017007.3-201ENST00000479865 435 ntBASIC17.39■□□□□ 0.37
USB1Q9BQ65 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.39■□□□□ 0.37
USB1Q9BQ65 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USB1Q9BQ65 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 RPS2P55-201ENST00000397318 883 ntBASIC17.38■□□□□ 0.37
USB1Q9BQ65 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 AC107956.1-201ENST00000494359 873 ntBASIC17.38■□□□□ 0.37
USB1Q9BQ65 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.38■□□□□ 0.37
USB1Q9BQ65 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USB1Q9BQ65 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 KRT17P2-201ENST00000300992 1314 ntBASIC17.37■□□□□ 0.37
USB1Q9BQ65 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms