Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
VRK1Q99986 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
VRK1Q99986 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.21■□□□□ 0.34
VRK1Q99986 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VRK1Q99986 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VRK1Q99986 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.2■□□□□ 0.34
VRK1Q99986 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VRK1Q99986 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VRK1Q99986 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.2■□□□□ 0.34
VRK1Q99986 UBE2SP1-201ENST00000450587 669 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 RPPH1-201ENST00000516869 333 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.2■□□□□ 0.34
VRK1Q99986 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 AC005829.2-201ENST00000571422 1056 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 AC233263.1-201ENST00000578059 224 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 AC069544.1-201ENST00000609399 999 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 MIR2861-201ENST00000636310 90 ntBASIC17.2■□□□□ 0.34
VRK1Q99986 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.2■□□□□ 0.34
VRK1Q99986 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VRK1Q99986 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.2■□□□□ 0.34
VRK1Q99986 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.2■□□□□ 0.34
VRK1Q99986 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VRK1Q99986 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK1Q99986 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 AC026471.1-201ENST00000564629 3026 ntBASIC17.19■□□□□ 0.34
VRK1Q99986 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
VRK1Q99986 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.19■□□□□ 0.34
VRK1Q99986 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.19■□□□□ 0.34
VRK1Q99986 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VRK1Q99986 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.19■□□□□ 0.34
VRK1Q99986 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.19■□□□□ 0.34
VRK1Q99986 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.19■□□□□ 0.34
VRK1Q99986 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VRK1Q99986 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VRK1Q99986 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VRK1Q99986 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VRK1Q99986 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VRK1Q99986 RPS2P4-201ENST00000476944 856 ntBASIC17.18■□□□□ 0.34
VRK1Q99986 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.18■□□□□ 0.34
VRK1Q99986 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.18■□□□□ 0.34
VRK1Q99986 RN7SL471P-201ENST00000580476 299 ntBASIC17.18■□□□□ 0.34
VRK1Q99986 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.18■□□□□ 0.34
VRK1Q99986 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VRK1Q99986 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms