Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ABCA3Q99758 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
ABCA3Q99758 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.18■■□□□ 1.78
ABCA3Q99758 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
ABCA3Q99758 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA3Q99758 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA3Q99758 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
ABCA3Q99758 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC26.18■■□□□ 1.78
ABCA3Q99758 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA3Q99758 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ABCA3Q99758 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA3Q99758 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC26.17■■□□□ 1.78
ABCA3Q99758 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC26.17■■□□□ 1.78
ABCA3Q99758 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.17■■□□□ 1.78
ABCA3Q99758 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA3Q99758 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
ABCA3Q99758 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
ABCA3Q99758 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC26.17■■□□□ 1.78
ABCA3Q99758 KRT17P6-201ENST00000453795 1220 ntBASIC26.17■■□□□ 1.78
ABCA3Q99758 SKP2-204ENST00000508514 821 ntTSL 3 BASIC26.17■■□□□ 1.78
ABCA3Q99758 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC26.17■■□□□ 1.78
ABCA3Q99758 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA3Q99758 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC26.17■■□□□ 1.78
ABCA3Q99758 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC26.17■■□□□ 1.78
ABCA3Q99758 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
ABCA3Q99758 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.16■■□□□ 1.78
ABCA3Q99758 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.16■■□□□ 1.78
ABCA3Q99758 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC26.16■■□□□ 1.78
ABCA3Q99758 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC26.16■■□□□ 1.78
ABCA3Q99758 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 AC092119.3-201ENST00000612618 583 ntBASIC26.16■■□□□ 1.78
ABCA3Q99758 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA3Q99758 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
ABCA3Q99758 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
ABCA3Q99758 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA3Q99758 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA3Q99758 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ABCA3Q99758 LINC01465-201ENST00000408887 1940 ntBASIC26.15■■□□□ 1.78
ABCA3Q99758 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA3Q99758 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA3Q99758 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA3Q99758 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA3Q99758 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA3Q99758 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.14■■□□□ 1.78
ABCA3Q99758 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA3Q99758 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA3Q99758 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
ABCA3Q99758 CR769767.2-201ENST00000622735 460 ntBASIC26.14■■□□□ 1.78
ABCA3Q99758 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
ABCA3Q99758 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA3Q99758 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.14■■□□□ 1.78
ABCA3Q99758 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
ABCA3Q99758 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA3Q99758 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA3Q99758 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.14■■□□□ 1.77
ABCA3Q99758 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA3Q99758 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC26.14■■□□□ 1.77
ABCA3Q99758 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC26.14■■□□□ 1.77
ABCA3Q99758 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC26.14■■□□□ 1.77
ABCA3Q99758 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC26.14■■□□□ 1.77
ABCA3Q99758 AL031008.1-201ENST00000619963 541 ntBASIC26.14■■□□□ 1.77
ABCA3Q99758 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC26.13■■□□□ 1.77
ABCA3Q99758 FP700111.2-201ENST00000619190 1892 ntBASIC26.13■■□□□ 1.77
ABCA3Q99758 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC26.13■■□□□ 1.77
ABCA3Q99758 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.13■■□□□ 1.77
ABCA3Q99758 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
ABCA3Q99758 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.13■■□□□ 1.77
ABCA3Q99758 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA3Q99758 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA3Q99758 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.12■■□□□ 1.77
ABCA3Q99758 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA3Q99758 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA3Q99758 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA3Q99758 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA3Q99758 MIR4674-201ENST00000582457 87 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms