Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 AC009237.14-201ENST00000609975 1594 ntBASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 AP001412.1-201ENST00000608405 714 ntBASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 AL353708.3-201ENST00000610272 989 ntBASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE1Q96MT3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 NIFKP9-201ENST00000419265 221 ntBASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 FAM197Y1-201ENST00000421178 764 ntBASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 AP002982.1-201ENST00000492365 877 ntBASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE1Q96MT3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 CD177P1-201ENST00000606252 935 ntBASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRICKLE1Q96MT3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE1Q96MT3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms