Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 AC106730.1-201ENST00000566722 1090 ntBASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 AC112497.1-201ENST00000624824 639 ntBASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
DCHS1Q96JQ0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 PMS2P7-201ENST00000506558 1336 ntBASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 AC131212.4-201ENST00000623606 975 ntBASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 AL353801.3-201ENST00000609898 542 ntBASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DCHS1Q96JQ0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 DRAXINP1-201ENST00000437611 948 ntBASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.77■□□□□ 0.6
DCHS1Q96JQ0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DCHS1Q96JQ0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
DCHS1Q96JQ0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.77■□□□□ 0.59
DCHS1Q96JQ0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DCHS1Q96JQ0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AL390719.2-201ENST00000606993 987 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AC244107.1-201ENST00000442033 332 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CA15P1-201ENST00000481698 905 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 LINC00167-201ENST00000530583 1419 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 AL773604.1-201ENST00000617417 272 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.76■□□□□ 0.59
DCHS1Q96JQ0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 RNPS1P1-201ENST00000507437 918 ntBASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 LINC01465-201ENST00000408887 1940 ntBASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.75■□□□□ 0.59
DCHS1Q96JQ0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms