Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 RARRES2P4-201ENST00000514074 484 ntBASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 AC100791.3-201ENST00000617619 330 ntBASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CNN2P6-201ENST00000439038 900 ntBASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 KRT8P20-201ENST00000423953 1409 ntBASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 AC068338.2-201ENST00000563278 1430 ntBASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC47A1Q96FL8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC47A1Q96FL8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SLC47A1Q96FL8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
SLC47A1Q96FL8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.39■□□□□ 0.54
SLC47A1Q96FL8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 MCRIP2P1-201ENST00000394346 511 ntBASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC47A1Q96FL8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 AC231657.2-201ENST00000624556 255 ntBASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC47A1Q96FL8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms