Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AP000525.1-201ENST00000608286 694 ntBASIC18.83■□□□□ 0.6
RNF31Q96EP0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RNF31Q96EP0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF31Q96EP0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF31Q96EP0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF31Q96EP0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF31Q96EP0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF31Q96EP0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF31Q96EP0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF31Q96EP0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF31Q96EP0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 FAM210CP-201ENST00000445714 574 ntBASIC18.82■□□□□ 0.6
RNF31Q96EP0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 LINC01006-201ENST00000333319 2292 ntBASIC18.82■□□□□ 0.6
RNF31Q96EP0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.82■□□□□ 0.6
RNF31Q96EP0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF31Q96EP0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 AC010331.1-201ENST00000611423 582 ntBASIC18.81■□□□□ 0.6
RNF31Q96EP0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF31Q96EP0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF31Q96EP0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 AC079598.2-202ENST00000546624 1451 ntBASIC18.8■□□□□ 0.6
RNF31Q96EP0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 AC004264.1-201ENST00000608354 794 ntBASIC18.8■□□□□ 0.6
RNF31Q96EP0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF31Q96EP0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF31Q96EP0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF31Q96EP0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF31Q96EP0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms