Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 AC073130.3-201ENST00000624389 2278 ntBASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 AC125437.2-201ENST00000625180 2167 ntBASIC19.59■□□□□ 0.73
ECHDC3Q96DC8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ECHDC3Q96DC8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 FAM197Y1-201ENST00000421178 764 ntBASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
ECHDC3Q96DC8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 TSPY7P-201ENST00000431358 1114 ntBASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 KRT16P1-201ENST00000399124 1418 ntBASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC3Q96DC8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC3Q96DC8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms