Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN23Q96B33 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 AC012313.10-201ENST00000623509 926 ntBASIC19.6■□□□□ 0.73
CLDN23Q96B33 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN23Q96B33 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN23Q96B33 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLDN23Q96B33 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN23Q96B33 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.59■□□□□ 0.73
CLDN23Q96B33 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN23Q96B33 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN23Q96B33 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CLDN23Q96B33 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN23Q96B33 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.58■□□□□ 0.73
CLDN23Q96B33 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN23Q96B33 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN23Q96B33 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN23Q96B33 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN23Q96B33 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN23Q96B33 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN23Q96B33 FBXW4P1-201ENST00000426721 2239 ntBASIC19.57■□□□□ 0.72
CLDN23Q96B33 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN23Q96B33 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN23Q96B33 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN23Q96B33 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN23Q96B33 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN23Q96B33 LINC01311-201ENST00000565162 1445 ntBASIC19.57■□□□□ 0.72
CLDN23Q96B33 FEM1AP4-201ENST00000443167 1987 ntBASIC19.57■□□□□ 0.72
CLDN23Q96B33 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN23Q96B33 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 KRT8P41-201ENST00000533985 1514 ntBASIC19.56■□□□□ 0.72
CLDN23Q96B33 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 AC092720.2-201ENST00000602388 1665 ntBASIC19.56■□□□□ 0.72
CLDN23Q96B33 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 NPAP1P7-201ENST00000613027 823 ntBASIC19.56■□□□□ 0.72
CLDN23Q96B33 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN23Q96B33 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN23Q96B33 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN23Q96B33 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN23Q96B33 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
CLDN23Q96B33 TSPY21P-201ENST00000433481 731 ntBASIC19.55■□□□□ 0.72
CLDN23Q96B33 TSPY23P-201ENST00000440136 739 ntBASIC19.55■□□□□ 0.72
CLDN23Q96B33 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN23Q96B33 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms