Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP6NLQ92738 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USP6NLQ92738 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP6NLQ92738 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP6NLQ92738 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
USP6NLQ92738 AC007225.1-201ENST00000566331 1836 ntBASIC22.18■■□□□ 1.14
USP6NLQ92738 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
USP6NLQ92738 AC006128.1-201ENST00000624704 1661 ntBASIC22.18■■□□□ 1.14
USP6NLQ92738 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP6NLQ92738 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.18■■□□□ 1.14
USP6NLQ92738 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP6NLQ92738 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP6NLQ92738 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP6NLQ92738 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.18■■□□□ 1.14
USP6NLQ92738 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.18■■□□□ 1.14
USP6NLQ92738 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.18■■□□□ 1.14
USP6NLQ92738 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.18■■□□□ 1.14
USP6NLQ92738 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.18■■□□□ 1.14
USP6NLQ92738 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.18■■□□□ 1.14
USP6NLQ92738 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
USP6NLQ92738 AL031432.5-201ENST00000641059 760 ntBASIC22.18■■□□□ 1.14
USP6NLQ92738 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP6NLQ92738 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
USP6NLQ92738 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 KRT18P48-201ENST00000434763 852 ntBASIC22.17■■□□□ 1.14
USP6NLQ92738 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.17■■□□□ 1.14
USP6NLQ92738 HOMER2P1-201ENST00000455653 964 ntBASIC22.17■■□□□ 1.14
USP6NLQ92738 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.17■■□□□ 1.14
USP6NLQ92738 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.17■■□□□ 1.14
USP6NLQ92738 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP6NLQ92738 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP6NLQ92738 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP6NLQ92738 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP6NLQ92738 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
USP6NLQ92738 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.17■■□□□ 1.14
USP6NLQ92738 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.16■■□□□ 1.14
USP6NLQ92738 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 DUSP5P1-201ENST00000441325 1139 ntBASIC22.16■■□□□ 1.14
USP6NLQ92738 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.16■■□□□ 1.14
USP6NLQ92738 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.16■■□□□ 1.14
USP6NLQ92738 AL441883.1-201ENST00000566170 1045 ntBASIC22.16■■□□□ 1.14
USP6NLQ92738 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.16■■□□□ 1.14
USP6NLQ92738 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP6NLQ92738 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.16■■□□□ 1.14
USP6NLQ92738 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
USP6NLQ92738 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.15■■□□□ 1.14
USP6NLQ92738 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 IER3-202ENST00000376377 1350 ntBASIC22.15■■□□□ 1.14
USP6NLQ92738 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 AC092720.2-201ENST00000602388 1665 ntBASIC22.15■■□□□ 1.14
USP6NLQ92738 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.15■■□□□ 1.14
USP6NLQ92738 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
USP6NLQ92738 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.15■■□□□ 1.14
USP6NLQ92738 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
USP6NLQ92738 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 CA15P1-201ENST00000481698 905 ntBASIC22.15■■□□□ 1.14
USP6NLQ92738 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.15■■□□□ 1.14
USP6NLQ92738 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.15■■□□□ 1.14
USP6NLQ92738 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.15■■□□□ 1.14
USP6NLQ92738 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.15■■□□□ 1.14
USP6NLQ92738 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.15■■□□□ 1.14
USP6NLQ92738 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.15■■□□□ 1.14
USP6NLQ92738 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP6NLQ92738 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.15■■□□□ 1.14
USP6NLQ92738 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.15■■□□□ 1.14
USP6NLQ92738 KRT8P8-201ENST00000434750 1448 ntBASIC22.14■■□□□ 1.14
USP6NLQ92738 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
USP6NLQ92738 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
USP6NLQ92738 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
USP6NLQ92738 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
USP6NLQ92738 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
USP6NLQ92738 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.14■■□□□ 1.13
USP6NLQ92738 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.14■■□□□ 1.13
USP6NLQ92738 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.14■■□□□ 1.13
USP6NLQ92738 AL512604.3-201ENST00000569583 964 ntBASIC22.14■■□□□ 1.13
USP6NLQ92738 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.14■■□□□ 1.13
USP6NLQ92738 AC116407.4-201ENST00000623319 1061 ntBASIC22.14■■□□□ 1.13
USP6NLQ92738 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.14■■□□□ 1.13
USP6NLQ92738 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.14■■□□□ 1.13
USP6NLQ92738 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
USP6NLQ92738 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms