Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAPGEF4Q8WZA2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 AL031133.1-201ENST00000406807 723 ntBASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 AC092647.4-201ENST00000457211 535 ntBASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF4Q8WZA2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 AL353719.1-201ENST00000566847 864 ntBASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF4Q8WZA2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.66■■□□□ 1.7
RAPGEF4Q8WZA2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 LINC01465-201ENST00000408887 1940 ntBASIC25.65■■□□□ 1.7
RAPGEF4Q8WZA2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 CA15P1-201ENST00000481698 905 ntBASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 AL512604.3-201ENST00000569583 964 ntBASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 AC011558.1-201ENST00000623459 338 ntBASIC25.64■■□□□ 1.7
RAPGEF4Q8WZA2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
RAPGEF4Q8WZA2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.64■■□□□ 1.69
RAPGEF4Q8WZA2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
RAPGEF4Q8WZA2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.63■■□□□ 1.69
RAPGEF4Q8WZA2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms