Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
SNED1Q8TER0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SNED1Q8TER0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNED1Q8TER0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNED1Q8TER0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 HCG4P8-203ENST00000443049 980 ntBASIC23.88■■□□□ 1.41
SNED1Q8TER0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SNED1Q8TER0 AC093458.2-201ENST00000623150 629 ntBASIC23.88■■□□□ 1.41
SNED1Q8TER0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.88■■□□□ 1.41
SNED1Q8TER0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNED1Q8TER0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SNED1Q8TER0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SNED1Q8TER0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.87■■□□□ 1.41
SNED1Q8TER0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.87■■□□□ 1.41
SNED1Q8TER0 PRSS44-201ENST00000515154 1146 ntBASIC23.87■■□□□ 1.41
SNED1Q8TER0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SNED1Q8TER0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SNED1Q8TER0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SNED1Q8TER0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
SNED1Q8TER0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
SNED1Q8TER0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SNED1Q8TER0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 KRT8P8-201ENST00000434750 1448 ntBASIC23.86■■□□□ 1.41
SNED1Q8TER0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 AP003041.3-201ENST00000527151 707 ntBASIC23.86■■□□□ 1.41
SNED1Q8TER0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 AC069148.1-201ENST00000608741 768 ntBASIC23.86■■□□□ 1.41
SNED1Q8TER0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNED1Q8TER0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.86■■□□□ 1.41
SNED1Q8TER0 KRT8P41-201ENST00000533985 1514 ntBASIC23.86■■□□□ 1.41
SNED1Q8TER0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNED1Q8TER0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SNED1Q8TER0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 SPDYE13P-201ENST00000445314 798 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 AL136038.3-201ENST00000561909 1096 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 AC006128.1-201ENST00000624704 1661 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 AC026396.1-201ENST00000419388 421 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 CKBP1-201ENST00000565489 1086 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.84■■□□□ 1.41
SNED1Q8TER0 AL031432.5-201ENST00000641059 760 ntBASIC23.84■■□□□ 1.41
SNED1Q8TER0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNED1Q8TER0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.83■■□□□ 1.41
SNED1Q8TER0 KRT8P45-201ENST00000414328 1447 ntBASIC23.83■■□□□ 1.41
SNED1Q8TER0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.83■■□□□ 1.41
SNED1Q8TER0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SNED1Q8TER0 AC007225.1-201ENST00000566331 1836 ntBASIC23.83■■□□□ 1.41
SNED1Q8TER0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
SNED1Q8TER0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
SNED1Q8TER0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SNED1Q8TER0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
SNED1Q8TER0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SNED1Q8TER0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms