Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PJA1Q8NG27 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.08■□□□□ 0.81
PJA1Q8NG27 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PJA1Q8NG27 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PJA1Q8NG27 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PJA1Q8NG27 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.07■□□□□ 0.8
PJA1Q8NG27 TSPY5P-201ENST00000426936 936 ntBASIC20.07■□□□□ 0.8
PJA1Q8NG27 FAM207BP-201ENST00000447172 505 ntBASIC20.07■□□□□ 0.8
PJA1Q8NG27 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 AC092667.1-201ENST00000434301 2586 ntBASIC20.07■□□□□ 0.8
PJA1Q8NG27 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PJA1Q8NG27 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PJA1Q8NG27 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PJA1Q8NG27 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PJA1Q8NG27 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PJA1Q8NG27 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 AL157384.1-201ENST00000445995 2473 ntBASIC20.06■□□□□ 0.8
PJA1Q8NG27 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PJA1Q8NG27 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 AP000692.2-201ENST00000608391 879 ntBASIC20.06■□□□□ 0.8
PJA1Q8NG27 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.06■□□□□ 0.8
PJA1Q8NG27 AC116562.4-202ENST00000641738 218 ntBASIC20.06■□□□□ 0.8
PJA1Q8NG27 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PJA1Q8NG27 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PJA1Q8NG27 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.05■□□□□ 0.8
PJA1Q8NG27 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PJA1Q8NG27 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.05■□□□□ 0.8
PJA1Q8NG27 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PJA1Q8NG27 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PJA1Q8NG27 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 CCR12P-201ENST00000446203 998 ntBASIC20.04■□□□□ 0.8
PJA1Q8NG27 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 COX11P1-201ENST00000489116 835 ntBASIC20.04■□□□□ 0.8
PJA1Q8NG27 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 AC130371.2-201ENST00000619443 611 ntBASIC20.04■□□□□ 0.8
PJA1Q8NG27 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PJA1Q8NG27 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.04■□□□□ 0.8
PJA1Q8NG27 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 KRT8P17-201ENST00000453110 1448 ntBASIC20.03■□□□□ 0.8
PJA1Q8NG27 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 PCED1CP-201ENST00000419887 785 ntBASIC20.03■□□□□ 0.8
PJA1Q8NG27 DUSP5P1-201ENST00000441325 1139 ntBASIC20.03■□□□□ 0.8
PJA1Q8NG27 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 YBX1P10-201ENST00000444752 975 ntBASIC20.03■□□□□ 0.8
PJA1Q8NG27 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.03■□□□□ 0.8
PJA1Q8NG27 AL121956.5-201ENST00000625261 221 ntBASIC20.03■□□□□ 0.8
PJA1Q8NG27 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PJA1Q8NG27 AF106564.1-201ENST00000607058 2553 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms