Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF439Q8NDP4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 AC116351.2-201ENST00000606540 1585 ntBASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 AC104771.1-201ENST00000603335 964 ntBASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 AC083880.1-201ENST00000608266 535 ntBASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF439Q8NDP4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AC142086.2-201ENST00000569753 217 ntBASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 HLA-B-256ENST00000639848 1089 ntBASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 AC018553.1-201ENST00000616682 1458 ntBASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF439Q8NDP4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 AC069152.1-201ENST00000438030 544 ntBASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms