Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.27■■□□□ 1
RNF169Q8NCN4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.27■■□□□ 1
RNF169Q8NCN4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF169Q8NCN4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF169Q8NCN4 AC004980.1-204ENST00000429707 299 ntBASIC21.27■■□□□ 1
RNF169Q8NCN4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF169Q8NCN4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.27■■□□□ 1
RNF169Q8NCN4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.27■■□□□ 1
RNF169Q8NCN4 AC026271.3-201ENST00000571884 352 ntBASIC21.27■■□□□ 1
RNF169Q8NCN4 AC092865.7-201ENST00000641832 219 ntBASIC21.27■■□□□ 1
RNF169Q8NCN4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF169Q8NCN4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.27■■□□□ 1
RNF169Q8NCN4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF169Q8NCN4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.27■■□□□ 1
RNF169Q8NCN4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.27■■□□□ 1
RNF169Q8NCN4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF169Q8NCN4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
RNF169Q8NCN4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF169Q8NCN4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 CRYGFP-201ENST00000418459 633 ntBASIC21.26■□□□□ 0.99
RNF169Q8NCN4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 SLC25A24-204ENST00000569674 2357 ntBASIC21.26■□□□□ 0.99
RNF169Q8NCN4 BX119927.1-201ENST00000636596 1552 ntBASIC21.26■□□□□ 0.99
RNF169Q8NCN4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF169Q8NCN4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AC113347.1-201ENST00000413321 391 ntBASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AL137013.1-201ENST00000432946 1228 ntBASIC21.25■□□□□ 0.99
RNF169Q8NCN4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AC097488.1-201ENST00000507834 756 ntBASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AL049597.2-201ENST00000565575 961 ntBASIC21.25■□□□□ 0.99
RNF169Q8NCN4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF169Q8NCN4 AL445228.2-201ENST00000605589 952 ntBASIC21.25■□□□□ 0.99
RNF169Q8NCN4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 SLC25A1P4-201ENST00000567977 778 ntBASIC21.24■□□□□ 0.99
RNF169Q8NCN4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF169Q8NCN4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 AC020907.5-201ENST00000624372 1936 ntBASIC21.23■□□□□ 0.99
RNF169Q8NCN4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF169Q8NCN4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms