Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 AL135905.2-201ENST00000584934 1404 ntBASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 AL353708.3-201ENST00000610272 989 ntBASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 RPS2P4-201ENST00000476944 856 ntBASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 AL158211.5-201ENST00000623583 2518 ntBASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC01555Q8NAE3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
LINC01555Q8NAE3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 NIFKP9-201ENST00000419265 221 ntBASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 AL353807.1-201ENST00000427475 662 ntBASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01555Q8NAE3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 MIR718-201ENST00000390190 70 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AP002982.1-201ENST00000492365 877 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AC113410.3-201ENST00000623366 203 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 HLA-A-209ENST00000638375 975 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 AL049637.2-201ENST00000641778 930 ntBASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01555Q8NAE3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms