Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.05■□□□□ 0.32
PNLDC1Q8NA58 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 MIR4758-201ENST00000577688 71 ntBASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PNLDC1Q8NA58 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 PTBP1P-201ENST00000554374 1601 ntBASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 AC105020.6-201ENST00000621523 1217 ntBASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 HTR7P1-202ENST00000624664 4411 ntBASIC17.03■□□□□ 0.32
PNLDC1Q8NA58 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 GUSBP6-202ENST00000438529 1198 ntBASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 AC093787.1-201ENST00000450396 207 ntBASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 AC142086.2-201ENST00000569753 217 ntBASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNLDC1Q8NA58 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms