Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 TERF1P2-201ENST00000583350 1212 ntBASIC15.97■□□□□ 0.15
LRTM2Q8N967 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 AL354751.1-201ENST00000412768 1863 ntBASIC15.97■□□□□ 0.15
LRTM2Q8N967 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM2Q8N967 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRTM2Q8N967 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 AC100791.3-201ENST00000617619 330 ntBASIC15.96■□□□□ 0.15
LRTM2Q8N967 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRTM2Q8N967 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM2Q8N967 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRTM2Q8N967 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRTM2Q8N967 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.96■□□□□ 0.14
LRTM2Q8N967 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.95■□□□□ 0.14
LRTM2Q8N967 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 AC123595.1-201ENST00000440769 1046 ntBASIC15.95■□□□□ 0.14
LRTM2Q8N967 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 AC110285.6-201ENST00000617652 491 ntBASIC15.95■□□□□ 0.14
LRTM2Q8N967 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM2Q8N967 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM2Q8N967 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 NOC2LP2-201ENST00000407594 1944 ntBASIC15.94■□□□□ 0.14
LRTM2Q8N967 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 AC023632.3-201ENST00000521633 145 ntBASIC15.94■□□□□ 0.14
LRTM2Q8N967 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM2Q8N967 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRTM2Q8N967 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms