Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 AP002982.1-201ENST00000492365 877 ntBASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 AC233702.5-201ENST00000584107 538 ntBASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 Z99916.2-201ENST00000604037 246 ntBASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1L1Q8N609 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 NIFKP9-201ENST00000419265 221 ntBASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 AP001412.1-201ENST00000608405 714 ntBASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRAM1L1Q8N609 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 AC073195.1-201ENST00000607241 877 ntBASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 AC125437.2-201ENST00000625180 2167 ntBASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAM1L1Q8N609 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAM1L1Q8N609 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 RPS2P4-201ENST00000476944 856 ntBASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 AC093827.2-201ENST00000512654 315 ntBASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAM1L1Q8N609 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms