Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 LIN28AP1-201ENST00000429574 405 ntBASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 AC063952.2-201ENST00000498792 1227 ntBASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ARHGEF28Q8N1W1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 CCR12P-201ENST00000446203 998 ntBASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 AL138966.2-201ENST00000621997 464 ntBASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ARHGEF28Q8N1W1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 ANKRD20A18P-201ENST00000359341 492 ntBASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 AK4P3-201ENST00000418260 669 ntBASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 YBX1P2-201ENST00000489612 999 ntBASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 AL023803.3-201ENST00000615559 522 ntBASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 AC130371.2-201ENST00000619443 611 ntBASIC27.16■■□□□ 1.94
ARHGEF28Q8N1W1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 TCF3P1-201ENST00000423021 1937 ntBASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 CA15P1-201ENST00000481698 905 ntBASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 AC092338.2-201ENST00000568827 1415 ntBASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 AC099778.1-201ENST00000568593 1911 ntBASIC27.15■■□□□ 1.94
ARHGEF28Q8N1W1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 SLC25A1P2-201ENST00000430693 912 ntBASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
ARHGEF28Q8N1W1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ARHGEF28Q8N1W1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
ARHGEF28Q8N1W1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ARHGEF28Q8N1W1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
ARHGEF28Q8N1W1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 CKBP1-201ENST00000565489 1086 ntBASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 AP003041.3-201ENST00000527151 707 ntBASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
ARHGEF28Q8N1W1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
ARHGEF28Q8N1W1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
ARHGEF28Q8N1W1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
ARHGEF28Q8N1W1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ARHGEF28Q8N1W1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ARHGEF28Q8N1W1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms