Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SIX5Q8N196 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
SIX5Q8N196 AC116407.4-201ENST00000623319 1061 ntBASIC20.02■□□□□ 0.8
SIX5Q8N196 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.02■□□□□ 0.8
SIX5Q8N196 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.02■□□□□ 0.8
SIX5Q8N196 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIX5Q8N196 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SIX5Q8N196 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.02■□□□□ 0.79
SIX5Q8N196 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SIX5Q8N196 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIX5Q8N196 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.02■□□□□ 0.79
SIX5Q8N196 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.02■□□□□ 0.79
SIX5Q8N196 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.02■□□□□ 0.79
SIX5Q8N196 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SIX5Q8N196 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SIX5Q8N196 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SIX5Q8N196 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 AL512604.3-201ENST00000569583 964 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 AL023973.1-201ENST00000624619 620 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 HLA-A-209ENST00000638375 975 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SIX5Q8N196 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.01■□□□□ 0.79
SIX5Q8N196 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.01■□□□□ 0.79
SIX5Q8N196 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
SIX5Q8N196 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 GUSBP5-202ENST00000510805 1989 ntBASIC20.01■□□□□ 0.79
SIX5Q8N196 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX5Q8N196 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SIX5Q8N196 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20■□□□□ 0.79
SIX5Q8N196 AC018553.1-201ENST00000616682 1458 ntBASIC20■□□□□ 0.79
SIX5Q8N196 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 AL391422.3-201ENST00000603791 2761 ntBASIC20■□□□□ 0.79
SIX5Q8N196 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20■□□□□ 0.79
SIX5Q8N196 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 TSPY17P-201ENST00000450329 467 ntBASIC20■□□□□ 0.79
SIX5Q8N196 GXYLT1P6-201ENST00000456472 1187 ntBASIC20■□□□□ 0.79
SIX5Q8N196 AL441883.1-201ENST00000566170 1045 ntBASIC20■□□□□ 0.79
SIX5Q8N196 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SIX5Q8N196 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20■□□□□ 0.79
SIX5Q8N196 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20■□□□□ 0.79
SIX5Q8N196 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20■□□□□ 0.79
SIX5Q8N196 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20■□□□□ 0.79
SIX5Q8N196 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX5Q8N196 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.99■□□□□ 0.79
SIX5Q8N196 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 AL023803.3-201ENST00000615559 522 ntBASIC19.99■□□□□ 0.79
SIX5Q8N196 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SIX5Q8N196 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.99■□□□□ 0.79
SIX5Q8N196 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX5Q8N196 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX5Q8N196 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms