Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 AC112907.2-201ENST00000448639 330 ntBASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 AL671277.2-201ENST00000458060 996 ntBASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 KRT18P56-201ENST00000507275 550 ntBASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 KRT18P48-201ENST00000434763 852 ntBASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 CKBP1-201ENST00000565489 1086 ntBASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL27A1Q8IZC6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL27A1Q8IZC6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 SPDYE13P-201ENST00000445314 798 ntBASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.48■□□□□ 0.55
COL27A1Q8IZC6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 LINC00565-201ENST00000562710 2331 ntBASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL27A1Q8IZC6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL27A1Q8IZC6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms