Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 AF186192.3-201ENST00000583427 947 ntBASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 AC113410.3-201ENST00000623366 203 ntBASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 KRT17P2-201ENST00000300992 1314 ntBASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM48Q8IWZ4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 MIR4785-201ENST00000585005 73 ntBASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRIM48Q8IWZ4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM48Q8IWZ4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
TRIM48Q8IWZ4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 AC073195.1-201ENST00000607241 877 ntBASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 AP001271.2-201ENST00000624018 1556 ntBASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM48Q8IWZ4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 AL157384.1-201ENST00000445995 2473 ntBASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 HCG11-201ENST00000411553 5696 ntBASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms