Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC27.96■■■□□ 2.07
UBR1Q8IWV7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
UBR1Q8IWV7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
UBR1Q8IWV7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 FEM1AP4-201ENST00000443167 1987 ntBASIC27.94■■■□□ 2.06
UBR1Q8IWV7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBR1Q8IWV7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 PRELID1P1-202ENST00000567272 903 ntBASIC27.93■■■□□ 2.06
UBR1Q8IWV7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
UBR1Q8IWV7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 LINC01465-201ENST00000408887 1940 ntBASIC27.92■■■□□ 2.06
UBR1Q8IWV7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 MIR3180-1-201ENST00000580374 94 ntBASIC27.92■■■□□ 2.06
UBR1Q8IWV7 MIR3180-3-201ENST00000584616 94 ntBASIC27.92■■■□□ 2.06
UBR1Q8IWV7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
UBR1Q8IWV7 BID-203ENST00000399765 1879 ntTSL 2 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 KRT17P6-201ENST00000453795 1220 ntBASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AC140113.3-201ENST00000605663 199 ntBASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AC092119.3-201ENST00000612618 583 ntBASIC27.91■■■□□ 2.06
UBR1Q8IWV7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC27.91■■■□□ 2.06
UBR1Q8IWV7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms