Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 AC074051.2-201ENST00000565115 352 ntBASIC19.91■□□□□ 0.78
CUL9Q8IWT3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 AC106028.4-201ENST00000614509 607 ntBASIC19.91■□□□□ 0.78
CUL9Q8IWT3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CUL9Q8IWT3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 HLA-F-220ENST00000434407 884 ntBASIC19.9■□□□□ 0.78
CUL9Q8IWT3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 AP003041.3-201ENST00000527151 707 ntBASIC19.9■□□□□ 0.78
CUL9Q8IWT3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 AC068473.5-201ENST00000616428 2072 ntBASIC19.9■□□□□ 0.78
CUL9Q8IWT3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 AL645939.2-201ENST00000427340 991 ntBASIC19.9■□□□□ 0.78
CUL9Q8IWT3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUL9Q8IWT3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CUL9Q8IWT3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CUL9Q8IWT3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CUL9Q8IWT3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CUL9Q8IWT3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.89■□□□□ 0.78
CUL9Q8IWT3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 SEC1P-202ENST00000473944 940 ntBASIC19.89■□□□□ 0.77
CUL9Q8IWT3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 MIR7706-201ENST00000613747 67 ntBASIC19.89■□□□□ 0.77
CUL9Q8IWT3 MIR6752-201ENST00000618442 71 ntBASIC19.89■□□□□ 0.77
CUL9Q8IWT3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.89■□□□□ 0.77
CUL9Q8IWT3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
CUL9Q8IWT3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 BCRP1-201ENST00000444246 691 ntBASIC19.87■□□□□ 0.77
CUL9Q8IWT3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CUL9Q8IWT3 AL606495.2-201ENST00000605867 535 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms