Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 PNMA6B-201ENST00000538162 1200 ntBASIC18.3■□□□□ 0.52
CCDC71Q8IV32 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
CCDC71Q8IV32 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71Q8IV32 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.28■□□□□ 0.52
CCDC71Q8IV32 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 AL359736.2-201ENST00000621992 437 ntBASIC18.28■□□□□ 0.52
CCDC71Q8IV32 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71Q8IV32 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 AC008550.1-201ENST00000511500 884 ntBASIC18.27■□□□□ 0.52
CCDC71Q8IV32 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71Q8IV32 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71Q8IV32 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms