Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL512604.3-201ENST00000569583 964 ntBASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 AC141257.4-201ENST00000634557 245 ntBASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 AC136944.6-201ENST00000634818 245 ntBASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS4Q8IUM7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21■□□□□ 0.95
NPAS4Q8IUM7 CD70-202ENST00000423145 881 ntTSL 2 BASIC21■□□□□ 0.95
NPAS4Q8IUM7 UPK3BP1-201ENST00000428678 509 ntBASIC21■□□□□ 0.95
NPAS4Q8IUM7 AC092647.4-201ENST00000457211 535 ntBASIC21■□□□□ 0.95
NPAS4Q8IUM7 CA15P1-201ENST00000481698 905 ntBASIC21■□□□□ 0.95
NPAS4Q8IUM7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
NPAS4Q8IUM7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21■□□□□ 0.95
NPAS4Q8IUM7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS4Q8IUM7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 AL031133.1-201ENST00000406807 723 ntBASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS4Q8IUM7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS4Q8IUM7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS4Q8IUM7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 AC011558.1-201ENST00000623459 338 ntBASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 AL031432.5-201ENST00000641059 760 ntBASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NPAS4Q8IUM7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NPAS4Q8IUM7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS4Q8IUM7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NPAS4Q8IUM7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms