Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 FAM8A6P-201ENST00000407496 1135 ntBASIC20.72■□□□□ 0.91
RNF135Q8IUD6 AL450487.1-201ENST00000426799 995 ntBASIC20.72■□□□□ 0.91
RNF135Q8IUD6 AC117947.1-201ENST00000427448 529 ntBASIC20.72■□□□□ 0.91
RNF135Q8IUD6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
RNF135Q8IUD6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 AC091390.4-202ENST00000476426 537 ntBASIC20.71■□□□□ 0.91
RNF135Q8IUD6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
RNF135Q8IUD6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
RNF135Q8IUD6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RNF135Q8IUD6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RNF135Q8IUD6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF135Q8IUD6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 AC128688.1-201ENST00000487626 519 ntBASIC20.7■□□□□ 0.9
RNF135Q8IUD6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF135Q8IUD6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 AP005242.2-201ENST00000580065 1175 ntBASIC20.69■□□□□ 0.9
RNF135Q8IUD6 AL031985.4-201ENST00000642138 673 ntBASIC20.69■□□□□ 0.9
RNF135Q8IUD6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms