Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AC093484.2-201ENST00000580996 2166 ntBASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST2H3AQ71DI3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 AC005332.7-201ENST00000614046 2005 ntBASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 ID1-201ENST00000376105 1233 ntBASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 SOX15-203ENST00000570788 1093 ntBASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 AL121906.2-201ENST00000621597 723 ntBASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST2H3AQ71DI3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HIST2H3AQ71DI3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.14■□□□□ 0.34
HIST2H3AQ71DI3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HIST2H3AQ71DI3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 AL355802.2-201ENST00000402069 882 ntBASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 AC008687.6-201ENST00000596318 630 ntBASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 AL121829.2-201ENST00000620908 328 ntBASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 AL020996.1-203ENST00000536896 2307 ntBASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
HIST2H3AQ71DI3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 UNC93B4-201ENST00000505679 747 ntBASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST2H3AQ71DI3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HIST2H3AQ71DI3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms