Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PTCHD4Q6ZW05 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 DUX4L16-201ENST00000555130 1264 ntBASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 AC011767.1-201ENST00000617410 1153 ntBASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCHD4Q6ZW05 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.96■□□□□ 0.46
PTCHD4Q6ZW05 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 AC016769.1-201ENST00000409132 1010 ntBASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 AC068338.2-201ENST00000563278 1430 ntBASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCHD4Q6ZW05 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 RARRES2P4-201ENST00000514074 484 ntBASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 RARRES2P6-201ENST00000567333 442 ntBASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 KRT16P6-202ENST00000425692 1426 ntBASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 KRT8P17-201ENST00000453110 1448 ntBASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCHD4Q6ZW05 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 AL138781.2-201ENST00000617896 1843 ntBASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 AP001271.2-201ENST00000624018 1556 ntBASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms