Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 AL445675.2-201ENST00000620291 557 ntBASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 AC097493.4-201ENST00000641197 219 ntBASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB11FIP1Q6WKZ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 AC012306.2-201ENST00000609350 630 ntBASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 KRT8P9-201ENST00000558927 1449 ntBASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB11FIP1Q6WKZ4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB11FIP1Q6WKZ4 AL512408.1-201ENST00000569378 2000 ntBASIC19.64■□□□□ 0.74
RAB11FIP1Q6WKZ4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB11FIP1Q6WKZ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 AL390955.1-201ENST00000428694 934 ntBASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB11FIP1Q6WKZ4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 AP005212.1-201ENST00000581547 1997 ntBASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 TMEM179-206ENST00000616017 1645 ntBASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC131212.4-201ENST00000623606 975 ntBASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB11FIP1Q6WKZ4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 AL391422.3-201ENST00000603791 2761 ntBASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB11FIP1Q6WKZ4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB11FIP1Q6WKZ4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms