Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NHLRC1Q6VVB1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 AC008687.6-201ENST00000596318 630 ntBASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NHLRC1Q6VVB1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NHLRC1Q6VVB1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 KRT18P6-201ENST00000555540 1265 ntBASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NHLRC1Q6VVB1 AC116562.4-201ENST00000641316 2276 ntBASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 AL121829.2-201ENST00000620908 328 ntBASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NHLRC1Q6VVB1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NHLRC1Q6VVB1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NHLRC1Q6VVB1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NHLRC1Q6VVB1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NHLRC1Q6VVB1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 BX323043.1-201ENST00000641006 1765 ntBASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms