Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H2AA3Q6FI13 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 RNA5SP413-201ENST00000516373 109 ntBASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 UNC93B5-201ENST00000530315 699 ntBASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 AL121829.2-201ENST00000620908 328 ntBASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H2AA3Q6FI13 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 AP006587.1-201ENST00000534129 1502 ntBASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST2H2AA3Q6FI13 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H2AA3Q6FI13 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H2AA3Q6FI13 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms